[gmx-users] how to calculate the area of per lipid in membrane

[Alan Dodd]

I don't know of anything publicly available, but have a look around for voronoi cell analysis.  People have used it before for lipid area calculation, and may be willing to let you use their code.  Alternatively, read up on the theory and try it yourself.

----- Original Message ----
From: linfu <linfu3200 at 126.com>
To: gmx-users <gmx-users at gromacs.org>
Sent: Wednesday, December 20, 2006 9:14:26 AM
Subject: [gmx-users] how to calculate the area of per lipid in membrane


Dear gmx community!

Could anyone help me how to perform the analysis of <the area of per lipid> 
after MEMBRANE simulation in NPT condition. because there is a protein inserted
in the membrane, it is difficult for me to calculate the area of per lipid directly.
what kinds of program can do such work.
Thank you very much in advance!

BEST REGARDS
Fu Lin  



_______________________________________________
gmx-users mailing list    gmx-users at gromacs.org
http://www.gromacs.org/mailman/listinfo/gmx-users
Please don't post (un)subscribe requests to the list. Use the 
www interface or send it to gmx-users-request at gromacs.org.
Can't post? Read http://www.gromacs.org/mailing_lists/users.php

__________________________________________________
Do You Yahoo!?
Tired of spam?  Yahoo! Mail has the best spam protection around 
http://mail.yahoo.com