[gmx-users] configuration error

[Michael John Hanby]

Also, verify you compile gromacs with the same compiler used for FFTW.
If you've already done that, you might try setting

export LD_LIBRARY_PATH=$FFTWINSTALL/lib:$LD_LIBRARY_PATH

And add the $FFTWINSTALL/include and lib to your CPPFLAGS and LDFLAGS
etc...

-----Original Message-----
From: gmx-users-bounces at gromacs.org
[mailto:gmx-users-bounces at gromacs.org] On Behalf Of David van der Spoel
Sent: Tuesday, December 26, 2006 9:10 AM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] configuration error

Cherry Y. Yates wrote:
> Dear gromacs developlers,
> 
> When I tried to parallelize GROMACS with intel
> fortran/C compiler on a Athlon cluster, I met this
> kind of error:
> 
> $ ./configure --enable-mpi
> .........
> checking size of int... configure: error: cannot
> compute sizeof (int), 77
> 
> What is wrong? Needs help!
> Thanks,
> 
> Cherry 
> 
> 
> __________________________________________________
> Do You Yahoo!?
> Tired of spam?  Yahoo! Mail has the best spam protection around 
> http://mail.yahoo.com 
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
check archives. you probably need to upgrade the fftw libraries.

-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
_______________________________________________
gmx-users mailing list    gmx-users at gromacs.org
http://www.gromacs.org/mailman/listinfo/gmx-users
Please don't post (un)subscribe requests to the list. Use the 
www interface or send it to gmx-users-request at gromacs.org.
Can't post? Read http://www.gromacs.org/mailing_lists/users.php