[gmx-users] Group not found in indexfile

Xavier Periole x.periole at rug.nl
Wed Feb 8 16:43:37 CET 2006


Farid Sa'adedin wrote:

> Dear Gmx Users,
>
> I have come across a message after grompp that I'm unfamiliar with:
>
> Fatal Error: Group DPP not found in the index file.

Probably that you manipulated your coordinate file and lost the C of
DPPC and in the mdp file and index it is still define as DPPC.

Solutions:
edit your index and change DPPC to DPP
edit your coordinate file and change DPP to DPPC.

XAvier

----------------------------------
 Xavier Periole - Ph.D.

 Dept. of Biophysical Chemistry / MD Group   
 Univ. of Groningen
 Nijenborgh 4
 9747 AG Groningen
 The Netherlands
 
 Tel: +31-503634329
 Fax: +31-503634398
 email: x.periole at rug.nl
 web-page: http://md.chem.rug.nl/~periole
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