[gmx-users] ff library confusion

Afshin Nasrabad anasrabad at yahoo.ca
Thu Feb 9 00:01:33 CET 2006


Hi again,

I did it (source GMXRC) but it still doesn't
work. Every time it loads the older ff library. The
env command shows that the variables changed but the
problem still there.

afshin


--- David van der Spoel <spoel at xray.bmc.uu.se> wrote:

> Afshin Nasrabad wrote:
> >  Hi everybody,
> >
> > I'm a new user of Gromacs. I installed the latest
> > version of program in my home directory in a
> cluster.
> > As the older version of program already instlled
> on
> > cluster by administrator, I put a prefix (my_) to
> all
> > binary files of program while compilation.
> Evrything
> > is 
> > fine unless when I run my_pdb2gmx command, the
> program
> > looks for the older forcefield library installed
> by
> > administartor. Is there any way to define the new
> path
> > for forcefield in my home directory where I
> installed
> > the new version?
> >   
> 
> source the GMXRC file in your bin dir.
> 
> > thanks,
> > afshin
> >
> >
> > 	
> >
> > 	
> > 		
> >
>
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> 
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> 
> 
> -- 
> David.
>
________________________________________________________________________
> David van der Spoel, PhD, Assoc. Prof., Molecular
> Biophysics group,
> Dept. of Cell and Molecular Biology, Uppsala
> University.
> Husargatan 3, Box 596,  	75124 Uppsala, Sweden
> phone:	46 18 471 4205		fax: 46 18 511 755
> spoel at xray.bmc.uu.se	spoel at gromacs.org  
> http://folding.bmc.uu.se
>
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