[gmx-users] rmsd-dist.xvg

Itamar Kass ikass at cc.huji.ac.il
Mon Feb 13 12:55:43 CET 2006

On Feb 13, 2006, at 11:09 AM, X.Periole wrote:

> To get the number of clusters you have to run the program
> again giving a cutoff, the minimum between the picks or
> another one.

Here I probably have to ask, if I have only one pick, should I chose  
a rmsd cutoff from the right slope of the graph? Is one pick  
indicates unnatural uniform simulation?

| Itamar Kass
| The Alexander Silberman
| Institute of Life Sciences
| Department of Biological Chemistry
| The Hebrew University, Givat-Ram
| Jerusalem, 91904, Israel
| Tel: +972-(0)2-6585194
| Fax: +972-(0)2-6584329
| Email: ikass at cc.huji.ac.il
| Homepage: http://www.ls.huji.ac.il/~membranelab/itamar/ 

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