[gmx-users] rmsf

Osmair Vital de Oliveira osmair at qt.dq.ufscar.br
Thu Jan 19 11:51:05 CET 2006


Dear Sampo,

Use option -res

Osmair
Brazil


> Hi,
>
> I'd like to calculate rmsf of a protein dynamics trajectory. g_rmsf
> seems to produce only fluctuations per atom. How could I produce graph
> with fluctuations per residue?
>
> Thanks,
>
> Sampo
>
>
>
>
> --
> Sampo Karkola
>
> Laboratory of Organic Chemistry
> Department of Chemistry
> Faculty of Science
> PO Box 55 (A.I. Virtasen aukio 1)
> FIN-00014 University of Helsinki
> Finland
>
> tel +358 9 19150369
> fax +358 9 19150366
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