[gmx-users] Joining log files ?

Stéphane Teletchéa steletch at jouy.inra.fr
Mon Jan 23 14:53:11 CET 2006


While submitting a parallel job (lam/MPI + gromacs 3.3), i'm facing a 
little problem : all processors logs are in a separate file (q0.log, 
q1.log, q2.log ... qn.log), and if the directory origin is not shared 
(for instance via an nfs connection), all theses files are output in 
different directories (i've put /tmp for all as for now).

Is there a way to tell the master node to use its own *scratch* for 
writing all information in one big log ? I assumed the compact option 
had this purposed but it seems this is not its role.

Thanks a lot for comments, suggestions,

Stéphane Téletchéa, PhD.                  http://www.steletch.org
Unité Mathématique Informatique et Génome http://migale.jouy.inra.fr/mig
INRA, Domaine de Vilvert                  Tél : (33) 134 652 121 / 3086
78352 Jouy-en-Josas cedex, France         Fax : (33) 134 652 901

More information about the gromacs.org_gmx-users mailing list