[gmx-users] SGI installation problem: forcing the compilation with gcc

Erik Lindahl lindahl at sbc.su.se
Tue Jan 31 10:13:21 CET 2006


Hi,

You can always set the environment variable CC to the compiler you  
want to use before running configure.


However, the error you're getting is really easy to fix - it just  
happens because we changed a header file, and
forgot to do

#include "shift_util.h"

in the header of ghat.c. Add that, and it should hopefully compile  
fine with the IRIX compilers too.

Cheers,

Erik

On Jan 31, 2006, at 6:10 AM, Dastmalchi wrote:

> Hi there,
>
> Is there a configure flag to force the use of GCC?
> Do you think this may fix the problem that I have in installation  
> of GROMACS on my sgi machine? As I posted my problem before I am  
> getting the following error message:
>
> ....
> ghat.lo ghat.c
> cc -DHAVE_CONFIG_H -I. -I. -I../../src -I../../include "-DGMXLIBDIR= 
> \"/usr/people/siavoush/programs/gromacs-3.3/share/top\"" -I/usr/ 
> local/include -r12000 -mips4 -O3 -OPT:IEEE_arithmetic=3
> -OPT:rsqrt=ON -SWP:loop_overhead -INLINE:=ON -LNO:opt=1 - 
> LNO:ou_further=3
> -OPT:Olimit=0:roundoff=3:alias=typed -woff 1174 - 
> D__INLINE_INTRINSICS -c
> ghat.c -Wp,-MDupdate,.deps/ghat.TPlo -o ghat.o
> cc-1515 cc: ERROR File = ghat.c, Line = 233
>   A value of type "int" cannot be assigned to an entity of type  
> "real ***".
>
>     gh      = mk_rgrid(ix,iy,iz);
>             ^
>
> 1 error detected in the compilation of "ghat.c".
> *** Error code 1 (bu21)
> *** Error code 1 (bu21)
> *** Error code 1 (bu21)
> *** Error code 1 (bu21)
>
> Best regards,
> Siavoush
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-----------------------------------------------------------
Erik Lindahl  <lindahl at sbc.su.se>     Backup address:  
<erik.lindahl at gmail.com>
Assistant Professor, Computational Structural Biology
Stockholm Bioinformatics Center, Stockholm University, SE 106 91  
Stockholm
Phone: +46 8 5537 8564     Fax: +46 8 5537 8214




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