[gmx-users] proper dihedrals

ARGYRIOS KARATRANTOS axk47 at psu.edu
Tue Jul 11 19:14:32 CEST 2006


Hi all, 

according to the manual the proper dihedrals are set, using  in the topology
file(top file) the inner two atoms of the dihedral. But how i can set the two
following dihedrals, which have the same inner atoms
C-O-C-H
C-O-C-C
but different external atoms, and of course different K values(KJ/mol)
Argyris Karatrantos



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