[gmx-users] REMD

X.Periole X.Periole at rug.nl
Tue Jul 11 19:53:02 CEST 2006


> so, if i observe in md.log an exchange like:
> "Repl ex  0    1    2 x   3" for e.g. time step 1
> that would convert into:
> "1      0   1   3   2"
> for remd.xvg. is that correct?

the way you translate looks reasonable but I never used
the version (?) you use so I won't be able to comment
more.

> the problem is, if i do something like this for the 
>entire time scale trjcat only outputs the simulation box 
>but no coordinates to the new trajectory. 

Other users should be able to help ...

XAvier



More information about the gromacs.org_gmx-users mailing list