[gmx-users] solvation of protein

[Srivastava, Dhiraj (UMC-Student)]

Hi
when i am trying to solvate my protein in water box, i am not getting my protein in the center of but at one face of water box with some atoms outside waterbox. what should i do for this problem? should i move center of my protein to the center of water box using some tcl script in vmd?
how can i include the crystallographic water in the *.gro file for simulation?