[gmx-users] Re: editconf -d

X.Periole X.Periole at rug.nl
Thu Jul 20 10:35:34 CEST 2006


On Thu, 20 Jul 2006 10:24:25 +0200 (CEST)
  Isabella Daidone <i.daidone at caspur.it> wrote:
> Hi,
> 
> this is what is written in one of the options in 
>editconf:
> " -[no]c   bool     no  Center molecule in box (implied 
>by -box and -d)".

Now you mention it !
did you try a two step process: 1) center (-c), 2) the 
edges (-d).

Could be the combination that goes wrong !

> Moreover, in the mailing list you can find discussion 
>about this topic with version 3.2 and David said it was a 
>bug (that -d -c did not really center).

So they should comment ! I have no idea.

Sorry
XAvier



More information about the gromacs.org_gmx-users mailing list