[gmx-users] corrupt trr file?
David van der Spoel
spoel at xray.bmc.uu.se
Tue Jul 25 09:26:53 CEST 2006
Samantha Kaye wrote:
> When I tried to cat the results of that continuation file (started from 4500) it also has a magic number error at frame 910 (which is now in the second file) so I will try to truncate my trr file as suggested.
did you say what platform this is? are the files larger than 2Gb?
> One further question, how do I get gmxcheck to tell me this? I don't get any output other than the error message. Is there a verbose option in there somewhere? At the moment I'm just running gmxcheck -f file.trr
It should say how many frames there are etc. but maybe not if it crashes...
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://folding.bmc.uu.se
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