[gmx-users] meaning of a grompp 3.3.1 error ?

David Mobley dmobley at gmail.com
Wed Jun 28 01:29:57 CEST 2006


You've specified too many parameters for some section somewhere in
your topology file; probably 3.2.1 wasn't checking for this. Usually
this would happen, for example, if you specify too many bond
parameters on a line in the bonds section, or too many atom indices
for distance restraints, or some such.

David


On 6/27/06, Ivana Mihalek <imihalek at bcm.edu> wrote:
> Dear all,
>
> when running grompp I get the following error
> in some cases (and I am not sure what makes these cases special)
>
> -------------------------------------------------------
> Program grompp, VERSION 3.3.1
> Source code file: toppush.c, line: 1180
>
> Fatal error:
> Incorrect number of parameters - found 6, expected 2 or 4.
> -------------------------------------------------------
>
>
> Anybody familiar with toppush.c, to tell me what kind
> of parameters is the program considering on the line 1180?
>
> (The same input works for grompp 3.2.1)
>
> Thanks,
>
> Ivana
>
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