[gmx-users] Error : Molecule type redefined
raja
raja_28 at fastmail.us
Sat Mar 18 04:11:34 CET 2006
Dear GMXION,
In a run for drug-enzyme simulation, the grompp run prior to em
, shows the following error
-------------------------------------------------------
Program grompp, VERSION 3.3
Source code file: toppush.c, line: 887
Fatal error:
moleculetype PN1 is redefined
-------------------------------------------------------
Where PN1 is the name of the drug, whose topology defined in DRG.itp
file and the file is included in protein.top
file. If I remove PN1 under [moleculetype] in any one of the file,either
in DRG.itp or protein.top, it works but showing different error of
mismatch coordinate between protein.top and protein.gro file as
expected.
What is the solution ?
With thanks !
B.Nataraj
--
raja
raja_28 at fastmail.us
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