[gmx-users] mpi problem

bfmilne at ff.up.pt bfmilne at ff.up.pt
Mon Mar 20 17:11:08 CET 2006


I fixed this problem on my login node on the cluster I'm using by getting the
libXm.so.3 file from another machine and copying it to
/home/bruce/lib/libXm.so.3. After that I could run GROMACS without
re-compiling. (At least it stops the complaints about the missing library and
lets you run jobs - I haven't tried the X interfaces to the programs though)



Quoting gmx-users-request at gromacs.org:

> Date: Mon, 20 Mar 2006 22:44:30 +0800
> From: Yang Ye <leafyoung81-group at yahoo.com>
> Subject: Re: [gmx-users] mpi problem
> To: Discussion list for GROMACS users <gmx-users at gromacs.org>
> Message-ID: <441EBFCE.6040002 at yahoo.com>
> Content-Type: text/plain; charset=GB2312
> Check your Linux's rpm resipository for a package containing this file.
> The best way of avoiding this could be using -without-x for Gromacs'
> configure.
> Yang Ye
> Rongliang Wu wrote:
>> hello all,
>> i've got a problem whem i intend to run a parallel mdrun, when i met 
>> with such error:
>> error while loading shared libraries: libXm.so.3: cannot open shared 
>> object file: No such file or directory
>> what's the problem and mpi is LAM
>> --------------
>> Rongliang Wu
>> 2006-03-20
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