[gmx-users] grompp problem

Rongliang Wu wurl04 at iccas.ac.cn
Tue Mar 21 10:00:26 CET 2006


hello all,
 the cyc.itp went well for my previous systems of tip4p and cyc, but after adding sds, i got warnings as showed below. the 296 and 153 line of sds.itp and cyc.itp respectively are the end of the file.

why?!! 

In file included from box.top:1:
sds.itp:296:1: warning: no newline at end of file
In file included from box.top:3:
cyc.itp:153:30: warning: no newline at end of file
processing topology...
Generated 332520 of the 332520 non-bonded parameter combinations
Generating 1-4 interactions: fudge = 0.5
Generated 332520 of the 332520 1-4 parameter combinations
WARNING 1 [file "sds.itp", line 102]:
  No default Bond types, using zeroes
WARNING 2 [file "sds.itp", line 103]:
  No default Bond types, using zeroes
WARNING 3 [file "sds.itp", line 104]:
  No default Bond types, using zeroes
WARNING 4 [file "sds.itp", line 105]:
  No default Bond types, using zeroes
WARNING 5 [file "sds.itp", line 181]:
  No default Angle types, using zeroes
WARNING 6 [file "sds.itp", line 182]:
  No default Angle types, using zeroes
WARNING 7 [file "sds.itp", line 183]:
  No default Angle types, using zeroes
WARNING 8 [file "sds.itp", line 184]:
  No default Angle types, using zeroes
WARNING 9 [file "sds.itp", line 185]:
  No default Angle types, using zeroes
WARNING 10 [file "sds.itp", line 186]:
  No default Angle types, using zeroes
Cleaning up temporary file gromppmL0ZER
-------------------------------------------------------
Program grompp, VERSION 3.3
Source code file: fatal.c, line: 416

Fatal error:
Too many warnings, grompp terminated
-------------------------------------------------------


 				
--------------
Rongliang Wu
2006-03-21





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