[gmx-users] pdb2gmx illegal instruction (core dumped)

Dongsheng Zhang dong at pampas.chem.purdue.edu
Tue Mar 21 17:14:48 CET 2006


Dear David,

Thank you very much for your quick reply. The machine is IBM. Then,
could you please tell me how to fix it? Thanks again.

Best Wishes!

Dongsheng

On Tue, 2006-03-21 at 17:00 +0100, David van der Spoel wrote:
> Dongsheng Zhang wrote:
> > Dear All,
> > 
> > I want to use gromacs in research computing center in my school. When I
> > used pdb2gmx as
> > pdb2gmx -f Ace5AlaNac -o Ace5AlaNac -p Ace5AlaNac -ignh -ter
> > 
> > it gave me an error message as follows,
> > illegal instruction (core dumped)
> > 
> what kind of computer? this kind of stuff usually happens on IBM boxes.
> 
> 
> > Could anyone give me a clue what is wrong? Thank you in advance!
> > 
> > 
> > Dongsheng
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