[gmx-users] ffG43a1.rtp file error
rob yang
nextgame at hotmail.com
Tue Mar 21 18:15:52 CET 2006
Hi Ken,
>#define gd_9 0.000 3.14 2
0.000 = phase shift. it takes on values of 0 or 180.
3.14 = force constant in KJ/mol
2 = multiplicity of the torsion term
the torsion equation is: Sum of {(Force constant)/2*(1+cos(phase
shift)*cos(multiplicity * your angle))}
it can theoretically go up to 6 terms (multiplicities)
it seems like there are two terms in this particular torsion, so if you are
sure that this is indeed your dihedral angle, you can add two lines to your
.itp file:
2 1 4 5 1 gd_9
2 1 4 5 1 gd_11
hope that helps.
Rob
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