[gmx-users] pdb2gmx illegal instruction

Tom Joseph tom-lists at jambon.ll.cx
Wed Mar 22 03:02:44 CET 2006

Certainly you should consult your documentation, but one possibility is:

mpirun -np 8 mdrun_mpi -np 8 -s pr -o pr -c after_pr -e pr -g pr  -v - 
N 8


On Mar 21, 2006, at 6:48 PM, Erik Lindahl wrote:

>> mdrun_mpi -np 8 mdrun -np 8 -s pr -o pr -c after_pr -e pr -g pr  - 
>> v -N 8
> This won't work. You should start mdrun_mpi, using the program  
> (mpirun or something) specified by your MPI library. There is no  
> standard for this, so consult the documentation for your MPI  
> implementation.
> Cheers,
> Erik
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