[gmx-users] fudgeLJ / fudgeQQ are multiplicative factors

David van der Spoel spoel at xray.bmc.uu.se
Tue May 2 11:10:27 CEST 2006


chris.neale at utoronto.ca wrote:
> Perhaps someone can add this to the next update of the manual (on page 101?)
> 
> Without going to Jorgensen's 1988 JACS paper it is difficult to be sure that
> fudge means multiply and not divide, especially given the most common usage of
> the word "factor" and that e.g. Berger Biophys. J. 1997 indicates "the LJ
> contribution was reduced by a factor of 8"
Thanks for the message, I just modified it.

> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
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