[gmx-users] Re: angle restraints
Maarten Wolf
maarten_wolf at yahoo.co.uk
Wed May 17 08:34:02 CEST 2006
David,
> > I do not understand this.
> > Turning the restraints off is only affecting the highed of dG/dl
> and
> > turning it off means that you slowly go to zero.
>
> If you were computing a free energy of removing restraints,
> dG/dlambda
> should be negative, since it releases energy to turn off restraints.
> In other words, it always costs energy to turn on restraints, so
> turning off restraints always releases energy.
>
> You're sure you haven't done something strange like turn on soft core
> potentials? Can you send along your mdp file?
I am not sure. I checked it, but maybe I missed something. I attached
my mdp file.
Thank you for taking the time to help me out here.
Maarten
>
> David
>
> >
> > Maarten
> >
> >
> > Send instant messages to your online friends
> http://uk.messenger.yahoo.com
> >
>
MvG Maarten
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