[gmx-users] Turning off the electrostatic interactions with PME
Maxim Fedorov
maxim.fedorov at ucd.ie
Wed May 17 21:44:06 CEST 2006
Dear all,
Does anybody know how to turn off electrostatic interactions (PME)
between two NONBONDED groups keeping the short-range van-der-waals
terms unchanged.
So, the question is: I have two groups (two different molecules) and I
would like
to switch off the ONLY electrostatic interactions betweent them during
MD run.
To avoid any overlapping between these groups I would like to keep the
short range nonbonded interactions between them.
And I don't want to change the nonbonded interactions of these groups
with other groups (water molecules, f.e.).
If I would use the cut-off it wouldn't be a problem (I'd cut the e-
interactions on the VDW distance) . But I am using the PME, and it is
not so clear for me how to do this 'selective' switching in that case.
Thank you in advance,
Maxim.
Maxim V. Fedorov,
Research Associate.
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