[gmx-users] how to use g_sham ?

Liang petrucci86 at vip.sina.com
Sat May 20 07:04:12 CEST 2006


Dear all users : 

g_sham is a new program in 3.3 and i cant find any  discussion about how to use in mailing lists, and i didnt catch the point about the instructions in user manual.
 
Is it possible to draw pics about PMF or free energy landscape using some special coordinates, like RMSD, potential, or dihedral angle variations etc. ?
and How to  set up the parameters to get a sensible picture?

thanks so much for any reply
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