[gmx-users] p4_error: interrupt SIGSEGV

Yangyang Shen yyshen at rci.rutgers.edu
Tue May 23 00:35:58 CEST 2006


Thanks for your reply, David.

The mpich version, I think it is mpich-1.2.7
And I use gcc (is this one type of mpi lib?) to compile.
Would pgi6.0 be another option?

Also I don't get this 'interrupt SIGSEGV' error for my other simulations.
Do you have any clue why?

Thanks a lot for your help.
Yangyang

On Mon, 22 May 2006, David van der Spoel wrote:

> Yangyang Shen wrote:
> > Hi,
> >
> > I get the following error immidiately after the mdrun starts
> >
> > p4_error: interrupt SIGSEGV: 11
> >
> > It is also reproducible if I run the same simulation again.
> >
> > Could anyone please give me some hint?
>
> which mpich version?
>
> you probably need to recompile with another mpi lib.
>
> >
> > Thanks a lot,
> >
> > Yangyang
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> --
> David.
> ________________________________________________________________________
> David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
> Dept. of Cell and Molecular Biology, Uppsala University.
> Husargatan 3, Box 596,  	75124 Uppsala, Sweden
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