[gmx-users] Best FF for Morse Potential
David van der Spoel
spoel at xray.bmc.uu.se
Tue May 30 07:59:47 CEST 2006
Егоров Д.А. wrote:
> Dear Gromacs list members,
>
> Is it possible to choose best force field to extract bond constants to
> reevaluate them into Morse potential parameters?
Harmonic bond potentials can be automatically converted to Morse. Check
the file share/gromacs/top/edissoc.dat for dissociation energies used. A
short description can be found in the manual IIRC.
>
> D. Egorov, USMA, Yekaterinburg, Russia.
>
>
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--
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://folding.bmc.uu.se
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