[gmx-users] Pdb for urea crystal

lijo skb lijo.skb at gmail.com
Wed Nov 1 10:55:49 CET 2006

Dear Siv

Me too have the same situation, I hope as if there is a very gentle
introductory handout on Gromacs, that will be helpful for we like new

Looking forward

On 11/1/06, Sivashangari Gnanasambandam <g0501135 at nus.edu.sg> wrote:
>  Hi,
>  <<one.gro>> <<one.pdb>> <<one.top>>
> I am very new to the GROMACS and I couldn't able to proceed further from
> converting a pdb file to gro file for one month.
> I tried to create topology file using the format suggested in mailing list
> but it shows the error '' No of coordinates in gro file does not match with
> topology'. I attached my gro and top file for your reference. Kindly help me
> to come out from my problem.
> Thank you
> Shankari
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Lijo Anto M.A, MCA, Mphil .
SooryaKiran Bioinformatics
Industry Incubation Center
University of Kerala
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