[gmx-users] g_confrms_d options

Arindam Ganguly arindamganguly at gmail.com
Thu Oct 5 15:18:13 CEST 2006

Hi David,
Thanks for the reply. very well i agree with what you have to say. however
in that case the answer  which i am getting for other options claiming that
the lsq fit say for backbone is 0.98732 so on ., are useless values. now
again if that is the case shoukld i assume that native structure RMSD
calculations using g_confrms_d is invalid.
David i hope this question of mine making sense. plz clarify if i am missing
something important. everyone is performing rmsd calculations on proteins,
what is that i am doing wrong here. thanks.

Arindam Ganguly
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