[gmx-users] Re: gmx-users Digest, Vol 30, Issue 18

[Mark Abraham]

Stefan Schöbel wrote:
> Hi folks,
> 
> I am running Gromacs under Linux Ubuntu. My question: where is my cpp located? It is not under /usr/bin/cpp.

"which cpp"

> And the other question: I try to simulate a protease together with its lipopeptide inhibitor, so I used Prodrg to get the files of the inhibitor but I get warnings that some atom types are not known, for example "HO".
> How do I know which are the correct atom type descriptions?

By chemical analogy with correct descriptions.

Mark