[gmx-users] Re: g_hbond error "Your computational box has shrunk too much"

andrea carotti andcar at chimfarm.unipg.it
Wed Oct 18 15:24:36 CEST 2006


The problem is that i don't have an energy file cause this time I'm
using gromacs only for analyze my trajs...so I don't know how to make
the plot you suggested. Now perhaps I've found a workaroud using trjconv
with the option -box 1 1 1 set, but I' don't know if this could be
correct.
(I've checked the ouput traj in VMD and seems fine, and with it g_hbond
is working)
Best
Andrea 
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