[gmx-users] gromacs instillation

Florian Haberl Florian.Haberl at chemie.uni-erlangen.de
Fri Oct 20 17:08:26 CEST 2006


On Friday 20 October 2006 13:03, graham jackson wrote:
> Dear All
> I am trying to install gromacs under SUSE10.1 using the rpm's.  Below are
> the messages I get.  Do I have to compile gromacs from scratch or can I get
> the dependencies from somewhere? Thanks
> Graham
>
> .gold:/home/jackson/x86_64 # rpm -Uvh lam-7.0.6-5.x86_64.rpm
> warning: lam-7.0.6-5.x86_64.rpm: Header V3 DSA signature: NOKEY, key ID
> 443e1821 error: Failed dependencies:
       gcc-g77 is needed by lam-7.0.6-5.x86_64
       openssh-clients is needed by lam-7.0.6-5.x86_64
       openssh-server is needed by lam-7.0.6-5.x86_64

These libs has to be installed. Suse 10.1 is a little bit broken, you should 
try yast for installing.

>
> x86_64 # rpm -Uvh libaio-0.3.105-2.x86_64.rpm
> warning: libaio-0.3.105-2.x86_64.rpm: Header V3 DSA signature: NOKEY, key
> ID 443e1821 Preparing...               
> ########################################### [100%] package libaio-0.3.105-2
> is already installed
>
> gold:/home/jackson/x86_64 # rpm -Uvh libaio-devel-0.3.105-2.x86_64.rpm
> warning: libaio-devel-0.3.105-2.x86_64.rpm: Header V3 DSA signature: NOKEY,
> key ID 443e1821 Preparing...               
> ########################################### [100%] package
> libaio-devel-0.3.105-2 is already installed
>
> gold:/home/jackson/x86_64 # rpm -Uvh fftw3-3.0.1-4.x86_64.rpm
> Preparing...                ###########################################
> [100%] package fftw3-3.0.1-124 (which is newer than fftw3-3.0.1-4) is
> already installed
>
> gold:/home/jackson/x86_64 # rpm -Uvh gromacs-3.3-1.x86_64.rpm
> Preparing...                ###########################################
> [100%] file /usr/share/man/man1/disco.1.gz from install of gromacs-3.3-1
> conflicts with file from package mono-web-1.1.13.7-6

Something is broken in  your installation.

Easiest thing is to compile gromacs from scratch as the gromacs faq say.


Greetings,

Florian


-- 
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 Florian Haberl                        
 Computer-Chemie-Centrum   
 Universitaet Erlangen/ Nuernberg
 Naegelsbachstr 25
 D-91052 Erlangen
 Telephone:  	+49(0) − 9131 − 85 26581
 Mailto: florian.haberl AT chemie.uni-erlangen.de
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