[gmx-users] strange new H-H bond formation during MD

Ignacio Fernández Galván jellby at yahoo.com
Mon Oct 23 16:25:39 CEST 2006

--- Mark Abraham <Mark.Abraham at anu.edu.au> wrote:

> Right, so like I said earlier, you're not giving it your topology, 
> because you're loading from a .gro file. Instead, VMD is making stuff
> up

Incidentally, you can disable this behaviour by loading the file in VMD
with "mol new myfile.gro autobonds 0" (or something like that).

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