[gmx-users] Extent of data transfer between nodes

Berk Hess gmx3 at hotmail.com
Tue Oct 31 08:37:01 CET 2006




>From: Itamar Kass <ikass at uq.edu.au>
>Reply-To: Discussion list for GROMACS users <gmx-users at gromacs.org>
>To: Gromax user group <gmx-users at gromacs.org>
>Subject: [gmx-users] Extent of data transfer between nodes
>Date: Tue, 31 Oct 2006 13:47:03 +1000
>
>Hi all,
>
>I wonder if someone can estimate the number of MPI calls/sec and
>Mbytes/sec transferred when using GROMACS 3.3.1 to simulate a system of
>~25K atoms?

That depends on many things: the type of system, the run parameters
and the hardware you are running on.

Why do you want to know?

Berk.

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