[gmx-users] problem in compiling g_velacc again under gromacs

Qiao Baofu qiaobf at gmail.com
Tue Oct 31 09:45:43 CET 2006


Hi all,

I want to comile the g_velacc again. I copy the original  gmx_velacc.c and
autocorr.c into a new directory, and then comile the gmx_velacc.c, but it
gives the following complains, and then exits. (I didn't change anything in
the two files!!)  How to solve it? Thanks a lot.

**************************************************************************************
/home/fias/qiao/Gromacs//lib/libgmxana.a(autocorr.o)(.text+0x22b0): In
function `low_do_autocorr':
: undefined reference to `xvgropen'
/home/fias/qiao/Gromacs//lib/libgmxana.a(autocorr.o)(.text+0x2e83): In
function `low_do_autocorr':
: undefined reference to `xvgropen'
/home/fias/qiao/Gromacs//lib/libgmxana.a(expfit.o)(.text+0x6cb): In function
`do_lmfit':
: undefined reference to `xvgropen'
collect2: ld returned 1 exit status
**************************************************************************************


The following are used to compile it:
GMXDIR='/home/fias/qiao/Gromacs/'
INCLUDE="-I${GMXDIR}/include/gromacs -I${GMXDIR}/include/gromacs/types"

LIBS="-L${GMXDIR}/lib -L/usr/X11R6/lib -L/lib -L/usr/lib -L${GMXDIR}/lib"
LDDFLAGS="-lXm -lmd -lm -lgmx -lgmxana -lnsl -lfftw3"
CCFLAGS="-O3"

gcc -g $INCLUDE $CCFLAGS -c gmx_velacc.c
gcc -g $CCFLAGS -o g_velacc  gmx_velacc.o -Wall $LIBS $LDDFLAGS
**************************************************************************************

-- 
Sincerely yours,
**********************************************
Baofu Qiao, PhD
Frankfurt Institute for Advanced Studies
Max-von-Laue-Str. 1
60438 Frankfurt am Main, Germany TEL:+49-69-7984-7529
**********************************************
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