[gmx-users] opls
singh
singh at biophysik.chemie.uni-dortmund.de
Fri Sep 1 18:56:11 CEST 2006
Dear Users,
I am trying to simulate a capped pentapeptide using OPLS force field.
Pdb2gmx runs successfully , however grompp gives following warnings
WARNING 1 [file "topol.top", line 632]:
No default Ryckaert-Bell. types, using zeroes
WARNING 2 [file "topol.top", line 857]:
No default Ryckaert-Bell. types, using zeroes
How should I proceed if these parameters are missing in OPLS.
The topology and gro files are attached herewith
Regards,
Gurpreet
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University of Dortmund
Department of Chemistry
Physical Chemistry I - Biophysical Chemistry
Otto-Hahn Str. 6
D-44227 Dortmund
Germany
Office: C1-06 room 176
Phone: +49 231 755 3916
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