[gmx-users] constrained minimization

David van der Spoel spoel at xray.bmc.uu.se
Mon Sep 11 14:05:58 CEST 2006


이 선주 wrote:
> Dear All
> 
> I just saw from the mailing list that David answered that the restrained 
> minimization can be done and it is different from the constrained 
> minimization. For the torsional parameter optimization, I think I need 
> to run minimization after constraining torsion angles. Does anyone know 
> the way to constrain the torsion angle during minimization?
> 
this is not implemented I'm afraid. Do you have a reference describing 
how to do it?


> Thank you in advance
> Sunjoo
> 
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
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