[gmx-users] Gromacs Surface tension
David van der Spoel
spoel at xray.bmc.uu.se
Thu Sep 14 03:19:28 CEST 2006
Pedro Alexandre Lapido Loureiro wrote:
>
>
>
>> Hi,
>> I am not sure if this is how I should ask questions regarding
>> Gromacs,
>> but here goes. I was wondering if anyone knows if there is an internal
>> program in Gromacs for calculating surface tension. I would like to
>> model
>> a lipid bilayer, and then determine the surface tension on that bilayer
>> under certain conditions. Is there an included way for me to do that in
>> Gromacs, or do I need to modify the Gromacs code?
>>
>> Thanks,
>> Mike
>>
>
> Use the option "#Surf*SurfTens" in g_energy.
>
and divide by two because you have two surfaces.
> Cheers.
>
> Pedro.
>
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--
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://folding.bmc.uu.se
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