[gmx-users] File input/output error:

Yang Ye leafyoung at yahoo.com
Wed Aug 1 09:21:10 CEST 2007


do you have MOL.pdb inside the current directory?

On 8/1/2007 2:44 PM, willting wrote:
> Dear all,
>
> When I wrote "pdb2gmx -f MOL.pdb -o MOL.gro -p MOL.top",and selected a 
> force field, it showed:
>
> Opening library file /usr/local/gromacs/share/gromacs/top/ffG43a1.rtp
> Opening library file /usr/local/gromacs/share/gromacs/top/aminoacidsdat
> Reading MOL.pdb...
> -------------------------------------------------------
> Program pdb2gmx, VERSION 3.3.1
> Source code file: /root/Desktop/gromacs-3.3.1/src/gmxlib/futil.c, 
> line: 340
>
> File input/output error:
> MOL.pdb
>
> what should I do?
>
> Thanks,
>
> will
>
>
>
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