[gmx-users] Residue abbreviation list with explanations

Sagittarius deckuofm at yahoo.com
Tue Aug 21 04:44:18 CEST 2007


Dear Gromacs users,
   
  Could you please help me to find a Residue abbreviation list web site.
I need to replace UNK below with something meaningful.
   
  formaldehyde.pdb looks like this:

  COMPND    UNNAMED                                                     
REMARK   1 PDB to MMOD atom-numbering translation table; the mmod numbers
REMARK   1 pertain to the .dat file from which this file was created,
REMARK   1 not to one created from this file:
REMARK   1  PDB:     1     2     3     4  
REMARK   1 MMOD:     1     2     3     4 /
HETATM    1  C01 UNK     0       0.000   0.302   0.000  0.00  0.00   0
HETATM    2  O02 UNK     0       0.000   1.510   0.000  0.00  0.00   0
HETATM    3  H03 UNK     0      -0.960  -0.262   0.000  0.00  0.00   0
HETATM    4  H04 UNK     0       0.960  -0.262   0.000  0.00  0.00   0
CONECT    1    3    4
CONECT    1    2
CONECT    1    2
CONECT    2    1
CONECT    2    1
CONECT    3    1
CONECT    4    1
END
  
Thank you in advance


       
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