[gmx-users] Error: number of coordinates in coordinate fileXXXX.pdb does not match topology (topol.top)

[Justin A. Lemkul]

Quoting Lycourgos Chiniadis <lchiniadis at gmail.com>:

> Dear Gromacs users,
>
> I tried the grompp and I got the following message: '' Error: number of
> coordinates in coordinate file XXXX.pdb does not match topology
> (topol.top)''.
>
> Is there any explanation why is this happening?
>
> I would appreciate any help. I am new in using MD and Gromacs in particular.
>
> Thank you in advance,
>
> Best regards,
>
> Lykourgos Chiniadis
> Agricultural University of Athens
> Physics Department
>

Check out

http://wiki.gromacs.org/index.php/Errors#Number_of_coordinates_in_coordinate_file_does_not_match_topology

Also try searching the list archives; this problem is often asked over the user
list.

-Justin

======================

Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul at vt.edu | (540) 231-9080
http://bevanlab.biochem.vt.edu/Pages/Personal/justin/

======================