[gmx-users] pbc problem
tangxuan82 at gmail.com
Tue Dec 4 14:34:56 CET 2007
My protein has 16 subunits. After I use trjconv '-pbc nojump' to remove
the jump in the whole protein, there are no jump to each subunits.
However, when i check pdb file of the first frame, it is shown that the
subunits are not in right position. The area of interface between some
subunits is zero, but it should not be. Could you give me some
suggestions how to solve this problem?
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