[gmx-users] AEDANS & DDPM

jayant_jacques jayant_jacques at rediffmail.com
Tue Dec 18 03:09:23 CET 2007

Hi all!
I am attempting to simulate a protein with AEDANS and DABMI attached to modified Cys. I got the .top files and .gro from PRODRG but on attempting simulations I get the error
Warning: 'DAB' not found in residue topology database,

So does any one have an idea how to build the residue topology for AEDANS   or DABMI.  Is there any program out there that can help!!
Jayant JAmes

Jayasundar Jayant James
Department of Veterinary and Comparative Anatomy, Pharmacology and Physiology(VCAPP), Washington state university, Pullman 99164-6520, USA.
Phone office:335-5937, Cell:1-509-432-5790
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