[gmx-users] insert protein in membrane
magnus.andersson at chalmers.se
Tue Dec 18 12:55:33 CET 2007
I have a .top file of a membrane protein (from an earlier project).
I also managed to generate a .gro file of a simple "membrane" consisting
of Argon atoms, of a certain volume.
How can I insert the protein into this membrane? I guess it somehow
involves how to combine the protein .top file and the membrane .gro file I
(I have tried generating a .top file from the membrane .gro file
(pdb2gmx), doesn't work. It deletes "duplicate atoms".
Can someone give me step-by-step instructions to this problem.
Greatly appreciate your help!
Chalmers University of Technology
Dept of Chemistry and Biological Engineering
Email: magnus.andersson at chalmers.se
Phone: +46 (0)31-786 3917
Fax: +46 (0)31-786 3910
SE-413 90 Göteborg
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