[gmx-users] pdb for a structure with more then 300 atoms

nur avneet nuravneet at yahoo.co.in
Wed Jan 3 12:09:01 CET 2007

Dear all
 I have a peptoid sequence (peptoids have the amino acid side chain appended to the amide nitrogen rather then alpha carbon) with more then 300 atoms. Please guide me an easy way to generate its pdb or gromacs coordinate and topology files, as PRODRG server doesnt work for more then 300 atoms.
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