[gmx-users] problem with genion

[David van der Spoel]

Abil Aliev wrote:
> While using genion with -np 3, i get 2 lines of Replacing sol. xxx with 
> Na and it hangs up. With -np 1 it works fine and replaces 1 SOL with Na. 
> I thought it might be my system, so went to /tutor/speptide, but it was 
> the same behaviour. I am using gromacs 3.3.1. As I recall genion worked 
> fine under 3.2.
> 
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> 
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there is a problem compiling gromacs using gcc 4.x that may cause this. 
see a recent bugzilla entry about it.

-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
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