[gmx-users] [Beginner] How can I generate .gro and .top?

Marcelo de Freitas Lima mflima at qmc.ufsc.br
Thu Jan 18 14:37:21 CET 2007

Dear all,

How can I generate a ".gro" and a ".top" from a ".pdb" file of a  
synthetic polymer residue (548 atoms with a random distribution of  
There is some tutorial to use gromacs with strutures like that,  
instead proteins?
The PRODRG webserver can't convert my structure, because there is so  
many atoms.

Thank you all,

All the best,


This message was sent using IMP, the Internet Messaging Program.

More information about the gromacs.org_gmx-users mailing list