[gmx-users] HETATM records of crystallized water

[SWAPNA]

I am doing MD study on RNase A with the crystallised water included.
The pdb file that I have contains RNase A + 188 crystallised water molecules.
The last being the HETATM type GROMACS cannot parametrize them.

So, it would be great if you can suggest me a way by which I can
include these 188 crystallised water molecules and still do the MD
study on RNase A using GROMACS 3.2.

Thanks!

Swapna
On 7/6/07, Mark Abraham <mark.abraham at anu.edu.au> wrote:
> > Hi,
> >
> > I am working with a pdb file that has 188 crystallised molecules.
> >
> > How can I include these water molecules?
>
> ...in what?
>
> You need to describe your task with specific details before we have a
> chance of helping you.
>
> Mark
>
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