[gmx-users] Which force-field for DNA-protein complex ?

Erik Marklund erikm at xray.bmc.uu.se
Wed Mar 7 10:08:47 CET 2007


I'm currently using AMBER03 for a DNA-protein complex. A little bit  
of struggle and extra examination of topologies and such was needed  
when setting up the system, but nothing too daunting.

/Erik

7 mar 2007 kl. 01.12 skrev mathieu coincon:

> I searched the database in order to choose which ff I should use.
> But I would like to have feadback from people used to such  
> simulations.
> Thanks by advance
>
> -------
> Mathieu Coincon
> PhD Student
> Universite de Montreal
> (+1)514-343-6111 #5352
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_______________________________________________
Erik Marklund, PhD student
Laboratory of Molecular Biophysics,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,	75124 Uppsala, Sweden
phone:	+46 18 471 4537		fax: +46 18 511 755
erikm at xray.bmc.uu.se	http://xray.bmc.uu.se/molbiophys





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