[gmx-users] REMD and demux.pl

Mark Abraham Mark.Abraham at anu.edu.au
Sun Mar 11 07:08:09 CET 2007


Arindam Ganguly wrote:
> Hi Mark,
> thanks for the prompt reply. i still have some questions.
> 
>    1. Since i have to install the new version, should i make a clean
>       install.
>    2. the version which i am currently using is _without_ MPI, so this
>       time i should be compliing or configuring it with MPI, as i
>       understand.
>    3. if i want to run it on a cluster, does all the nodes need to have
>       the same distribution of Linux(i am using Suse 10.1) and also does
>       all nodes need to have GROMACS installed in all of them. 

demux.pl is stand-alone... it doesn't require MPI, o r even a full 
installation of gromacs. Just get the CVS version and copy this script 
somewhere useful.

Mark



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