[gmx-users] mindist during MD

[spitaleri.andrea at hsr.it]

Hi all,
my rlist = rcoulomb = rvdw = 0.9 and during my simulation I have mindist
0.968 at 460 ps over 2ns total. the starting point was 1.8 and the
mindist fluctuates from 1 to 2. is it normal this kind of behaviour (so
spread I mean)? the box and the volume seem okay.
any help?

thanks in advance

Regards,

andrea

Andrea Spitaleri PhD
Dulbecco Telethon Institute 
c/o DIBIT Scientific Institute
Biomolecular NMR, 1B4
Via Olgettina 58
20132 Milano (Italy)



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